Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
sirplus
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Model registry
Operate
Environments
Monitor
Incidents
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
BioCellGen-public
sirplus
Commits
37dd640e
Commit
37dd640e
authored
5 years ago
by
Luke Zappia
Browse files
Options
Downloads
Patches
Plain Diff
Update NEWS.Rd
parent
21aa3e4f
No related branches found
Branches containing commit
No related tags found
No related merge requests found
Changes
3
Hide whitespace changes
Inline
Side-by-side
Showing
3 changed files
DESCRIPTION
+1
-1
1 addition, 1 deletion
DESCRIPTION
NEWS.md
+6
-2
6 additions, 2 deletions
NEWS.md
inst/NEWS.Rd
+20
-1
20 additions, 1 deletion
inst/NEWS.Rd
with
27 additions
and
4 deletions
DESCRIPTION
+
1
−
1
View file @
37dd640e
Package: splatter
Type: Package
Title: Simple Simulation of Single-cell RNA Sequencing Data
Version: 1.9.1
0
Version: 1.9.1
1
Date: 2019-10-20
Authors@R:
c(person("Luke", "Zappia", role = c("aut", "cre"),
...
...
This diff is collapsed.
Click to expand it.
NEWS.md
+
6
−
2
View file @
37dd640e
# DEVELOPMENT VERSION
## Version 1.9.11 (2019-10-20)
*
Update NEWS.Rd
## Version 1.9.10 (2019-10-20)
*
Update scater QC function names
...
...
@@ -12,8 +16,8 @@
## Version 1.9.8 (2019-10-11)
*
Add Kersplat simulation! Still experimental but is useable.
`
* Check for counts assay when estimating from SingleCellExperiment objects
`
(Fixes #82)
*
Check for counts assay when estimating from SingleCellExperiment objects
(Fixes #82)
*
Fix where simpleSimulate stores parameters (Fixes #72)
### Version 1.9.7.9019 (2019-10-11)
...
...
This diff is collapsed.
Click to expand it.
inst/NEWS.Rd
+
20
−
1
View file @
37dd640e
\name{NEWS}
\title{News for Package \pkg{splatter}}
\section{Version 1.8.0, Bioconductor 3.9 Release (2018-04-18)}{
\section{Version 1.10.0, Bioconductor 3.10 Release (2019-10-20)}{
\itemize{
\item{Add the (experimental) Kersplat simulation model. This model
incorporates a gene network and other useful features.}
\item{Refactor the summariseDiff function and add the KS statistic.}
\item{Add variable gene correlation plot to compareSCEs and violins to
other comparison plots.}
\item{Check for counts assay when estimating from SingleCellExperiment
objects.}
\item{Fix where simpleSimulate stores parameters.}
\item{Fix bugs where parameters were not being passed correctly in
BASiCSEstimate and sparseDCEstimate.}
\item{Replace the sc_example_counts dataset from scater with the mockSCE
function.}
\item{Tidy and improve estimation function examples and add checks for
suggested packages.}
\item{Various fixes for compatibility with updates to other packages.}
}
\section{Version 1.8.0, Bioconductor 3.9 Release (2019-04-18)}{
\itemize{
\item{Add a Splat parameters vignette}
\item{Rename the Splat path.length parameter to path.nSteps}
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment