From 37dd640e29f2374cad5457b1369a8cc8e4c29e98 Mon Sep 17 00:00:00 2001 From: Luke Zappia <lazappi@users.noreply.github.com> Date: Sun, 20 Oct 2019 22:52:17 +1100 Subject: [PATCH] Update NEWS.Rd --- DESCRIPTION | 2 +- NEWS.md | 8 ++++++-- inst/NEWS.Rd | 21 ++++++++++++++++++++- 3 files changed, 27 insertions(+), 4 deletions(-) diff --git a/DESCRIPTION b/DESCRIPTION index 6a7515c..99fc017 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,7 +1,7 @@ Package: splatter Type: Package Title: Simple Simulation of Single-cell RNA Sequencing Data -Version: 1.9.10 +Version: 1.9.11 Date: 2019-10-20 Authors@R: c(person("Luke", "Zappia", role = c("aut", "cre"), diff --git a/NEWS.md b/NEWS.md index b6d2492..8e327da 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,5 +1,9 @@ # DEVELOPMENT VERSION +## Version 1.9.11 (2019-10-20) + +* Update NEWS.Rd + ## Version 1.9.10 (2019-10-20) * Update scater QC function names @@ -12,8 +16,8 @@ ## Version 1.9.8 (2019-10-11) * Add Kersplat simulation! Still experimental but is useable. -`* Check for counts assay when estimating from SingleCellExperiment objects -` (Fixes #82) +* Check for counts assay when estimating from SingleCellExperiment objects + (Fixes #82) * Fix where simpleSimulate stores parameters (Fixes #72) ### Version 1.9.7.9019 (2019-10-11) diff --git a/inst/NEWS.Rd b/inst/NEWS.Rd index 39facd9..a805735 100644 --- a/inst/NEWS.Rd +++ b/inst/NEWS.Rd @@ -1,7 +1,26 @@ \name{NEWS} \title{News for Package \pkg{splatter}} -\section{Version 1.8.0, Bioconductor 3.9 Release (2018-04-18)}{ +\section{Version 1.10.0, Bioconductor 3.10 Release (2019-10-20)}{ + \itemize{ + \item{Add the (experimental) Kersplat simulation model. This model + incorporates a gene network and other useful features.} + \item{Refactor the summariseDiff function and add the KS statistic.} + \item{Add variable gene correlation plot to compareSCEs and violins to + other comparison plots.} + \item{Check for counts assay when estimating from SingleCellExperiment + objects.} + \item{Fix where simpleSimulate stores parameters.} + \item{Fix bugs where parameters were not being passed correctly in + BASiCSEstimate and sparseDCEstimate.} + \item{Replace the sc_example_counts dataset from scater with the mockSCE + function.} + \item{Tidy and improve estimation function examples and add checks for + suggested packages.} + \item{Various fixes for compatibility with updates to other packages.} +} + +\section{Version 1.8.0, Bioconductor 3.9 Release (2019-04-18)}{ \itemize{ \item{Add a Splat parameters vignette} \item{Rename the Splat path.length parameter to path.nSteps} -- GitLab