Commits · b5dc347210fdd90c72bd3c01fe0cd61007efe971 · BioCellGen-public / sirplus

Apr 20, 2020
- update ORCID · b5dc3472
  pqiao29 authored 4 years ago
  
  b5dc3472
- run devtools::check() instead of R CMD check · d028a750
  pqiao29 authored 4 years ago
  
  d028a750
- build pkgdown · 59bcd4f4
  pqiao29 authored 4 years ago
  
  59bcd4f4
Apr 19, 2020
- update README · 60e98ae2
  pqiao29 authored 4 years ago
  
  60e98ae2
- build pkgdown, version to 0.2.0 · 67959aee
  pqiao29 authored 4 years ago
  
  67959aee
Apr 17, 2020
- fix error exporting cut · aa9b29c7
  Christina Azodi authored 4 years ago
  
  aa9b29c7
- fixed merge errors in plot function · 8e877450
  Christina Azodi authored 4 years ago
  
  8e877450
- convert hosp fig into dot plot · e1e1da6c
  Christina Azodi authored 4 years ago
  
  e1e1da6c
- minor change to remove check warnings · a8c57298
  pqiao29 authored 4 years ago
  
  a8c57298
- remove vignette intro v1 · e476da9a
  Christina Azodi authored 4 years ago
  
  e476da9a
- fix input error with hospital plots · a4827724
  Christina Azodi authored 4 years ago
  
  a4827724
- add floor_date to namespace · e94aa38f
  Christina Azodi authored 4 years ago
  
  e94aa38f
- add group_by to namespace · 04152e07
  Christina Azodi authored 4 years ago
  
  04152e07
- Merge branch 'master' of https://gitlab.svi.edu.au/biocellgen-private/sirplus · bd8058f1
  Christina Azodi authored 4 years ago
  
  bd8058f1
- fixed hosp plots · 7b63903d
  Christina Azodi authored 4 years ago
  
  7b63903d
- update hosp weekly to have ci bars · b0e4bce9
  Christina Azodi authored 4 years ago
  
  b0e4bce9
Apr 16, 2020
- typo · 11c97cee
  pqiao29 authored 4 years ago
  
  11c97cee
- Add model diagram · 96c86d46
  pqiao29 authored 4 years ago
  
  96c86d46
- change I,Q,H->R to I,Q->R · e41e58a2
  pqiao29 authored 4 years ago
  
  e41e58a2
- fix check warnings · 0409143d
  pqiao29 authored 4 years ago
  
  0409143d
- merge · ec8f96ca
  pqiao29 authored 4 years ago
  
  ec8f96ca
- minor change · 67085cdd
  pqiao29 authored 4 years ago
  
  67085cdd
- big spell check · 62a3fa69
  Christina Azodi authored 4 years ago
  
  62a3fa69
- update to check if ggplot object · 787b5139
  Christina Azodi authored 4 years ago
  
  787b5139
- fix plotting list instead of single sim · ba14be5e
  Christina Azodi authored 4 years ago
  
  ba14be5e
- fix mini bug with pulling CIs from summary · 602f8f67
  Christina Azodi authored 4 years ago
  
  602f8f67
- merge my and puxues mods · fd6285fb
  Christina Azodi authored 4 years ago
  
  fd6285fb
- updated to include plotting CIs known and by compartment · 0735160e
  Christina Azodi authored 4 years ago
  
  0735160e
Apr 15, 2020
- Distinguish default and user passed parameters · 33e65b13
  pqiao29 authored 4 years ago
  
  33e65b13
- add print.summary · c6fb1798
  pqiao29 authored 4 years ago
  
  c6fb1798
- add plot(method = weekly_local) · 6f93922a
  pqiao29 authored 4 years ago
  
  6f93922a
- remove set_param · e9099e5d
  pqiao29 authored 4 years ago
  
  e9099e5d
Apr 13, 2020
- S3 methods in progress: summary, plot (times, models) · 0ec19e81
  pqiao29 authored 4 years ago
  
  0ec19e81
Apr 12, 2020

S3 in progress: control_seiqhrf, init_seiqhrf, param_seiqhrf,... · 1347a149

pqiao29 authored 4 years ago

S3 in progress: control_seiqhrf, init_seiqhrf, param_seiqhrf, as.data.frame.seiqhrf, print(control, init, param, model), usage in vignette v2

1347a149

Apr 08, 2020
- add quantile 95% CI in summary · 3dc7a609
  pqiao29 authored 4 years ago
  
  3dc7a609
- clear function names: icm.seiqhrf -> seiqhrf · 29f9599f
  pqiao29 authored 4 years ago
  
  29f9599f
- clear function names: control.icm -> control_seiqhrf · 4259cd14
  pqiao29 authored 4 years ago
  
  4259cd14
- debug summary · 8f3cfa91
  pqiao29 authored 4 years ago
  
  8f3cfa91
Apr 07, 2020
- add summary_seiqhrf · 457cde42
  pqiao29 authored 4 years ago
  
  457cde42
Apr 06, 2020
- make default values consistent with previous version · 0bc5ac41
  pqiao29 authored 4 years ago
  
  0bc5ac41