fix error exporting cut

NAMESPACE

@@ -46,7 +46,6 @@ importFrom(dplyr,summarise)
 importFrom(foreach,"%dopar%")
 importFrom(foreach,foreach)
 importFrom(future,availableCores)
-importFrom(lubridate,cut)
 importFrom(lubridate,ymd)
 importFrom(stats,pweibull)
 importFrom(stats,rbinom)

R/FIN_plot.R

@@ -327,7 +327,6 @@ plot_times <- function(sim) {
 #' 
 #' @importFrom tidyr pivot_wider
 #' @importFrom dplyr group_by
-#' @importFrom lubridate cut
 #' @importFrom dplyr summarise
 #' @export
 get_weekly_local <- function(sim, 

man/format_sims.Rd

@@ -4,12 +4,12 @@
 \alias{format_sims}
 \title{Format seiqhrf objects into dataframe for ggplot}
 \usage{
-format_sims(x, time_lim, start_date)
+format_sims(x, time_limit, start_date)
 }
 \arguments{
 \item{x}{An seiqhrf object returned from function \code{\link{seiqhrf}}.}
 
-\item{time_lim}{Number of steps (days) to plot.}
+\item{time_limit}{Number of steps (days) to plot.}
 
 \item{start_date}{Date for day 0. Default: ymd("2020-03-21"),}
 }

man/get_weekly_local.Rd

@@ -6,20 +6,12 @@
 \usage{
 get_weekly_local(
   sim,
-<<<<<<< HEAD
   market.share = market.share,
   icu_percent = icu_percent,
   start_date = start_date,
   show_start_date = show_start_date,
-  time_lim = time_lim,
+  time_limit = time_limit,
   total_population = total_population
-=======
-  market.share,
-  icu_percent,
-  start_date,
-  time_lim,
-  total_population
->>>>>>> a8c57298caf1bdc80ae8ae8f15fc65d70d4b2b86
 )
 }
 \arguments{
@@ -35,12 +27,10 @@ ICU among the ones that need hospitalization}
 plot week numbers, if provided will plot the first day (Sunday) of the
 week.}
 
-<<<<<<< HEAD
 \item{show_start_date}{First date to show in plots. Use ymd format. If FALSE,
 shows from step 1. Default: FALSE}
-=======
-\item{time_lim}{Number of days to include. Default = 90.}
->>>>>>> a8c57298caf1bdc80ae8ae8f15fc65d70d4b2b86
+
+\item{time_limit}{Number of days to include. Default = 90.}
 
 \item{total_population}{True population size, needed only if simulation size 
 is smaller than the true population size due to computational cost 

man/plot.list.Rd

@@ -7,7 +7,7 @@
 \method{plot}{list}(
   x,
   comp_remove = "none",
-  time_lim = 90,
+  time_limit = 90,
   ci = TRUE,
   sep_compartments = FALSE,
   trans = FALSE,
@@ -23,7 +23,7 @@
 
 \item{comp_remove}{Compartments to remove. Suggest c(s.num, r.num)}
 
-\item{time_lim}{Number of steps (days) to plot.}
+\item{time_limit}{Number of steps (days) to plot.}
 
 \item{ci}{T/F to include 95\% confidence intervals in sirplus plot.}
 

man/plot.seiqhrf.Rd

@@ -8,7 +8,7 @@
   x,
   method = NULL,
   comp_remove = "none",
-  time_lim = 90,
+  time_limit = 90,
   ci = TRUE,
   sep_compartments = FALSE,
   trans = FALSE,
@@ -33,7 +33,7 @@ If NULL, plot sirplus plots.}
 
 \item{comp_remove}{Compartments to remove. Suggest c(s.num, r.num)}
 
-\item{time_lim}{Number of steps (days) to plot.}
+\item{time_limit}{Number of steps (days) to plot.}
 
 \item{ci}{T/F to include 95\% confidence intervals in sirplus plot.}
 

man/plot_sirplus.Rd

@@ -7,7 +7,7 @@
 plot_sirplus(
   x,
   comp_remove,
-  time_lim,
+  time_limit,
   ci,
   sep_compartments,
   trans,
@@ -24,7 +24,7 @@ from \code{\link{seiqhrf}}.}
 
 \item{comp_remove}{Compartments to remove. Suggest c(s.num, r.num)}
 
-\item{time_lim}{Number of steps (days) to plot.}
+\item{time_limit}{Number of steps (days) to plot.}
 
 \item{ci}{T/F to include 95\% confidence intervals in sirplus plot.}