- Mar 20, 2017
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l.zappia authored
* master: Version 0.99.11 Run checks Fix mean-zeros scale Make lun2Estimate parallel Allow non-interger Lun 2 lib sizes Fix dropout eta From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127511 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Mar 07, 2017
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l.zappia authored
* master: Version 0.99.10 Remove out.loProb from vignette Update default Splat parameters Remove out.loProb parameter Update estimation procedure From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127213 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Feb 02, 2017
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l.zappia authored
* master: Bump version number Update scDD reference Add addGeneLengths to vignette Add addGeneLengths tests Add addGeneLengths function Update Roxygen version Update README Add bioc-devel to Travis From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@126415 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Jan 23, 2017
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l.zappia authored
* master: (123 commits) Fix non-linear path factors Bump verison number Set some examples to not run to save check time Initalise scDatEx to avoid NOTE Tidy up and bump version Replace 1:x Remove splatter.Rproj Add more detail about counts matrix Add installation to vignette Set R_TESTS environment Bump version to start build splatter 0.99.3 Updata scDDEstimate Add condition parameter Modify SCDDParams to take SummarizedExperiment Add logo to vignettes directory Remove scDD github remote Update to R-devel Address Bioconductor build warnings, notes Prepare for Bioconductor submission ... From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@126081 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Jan 13, 2017
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mtmorgan@fhcrc.org authored
git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@125902 bc3139a8-67e5-0310-9ffc-ced21a209358
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