* master:
  Version 0.99.11
  Run checks
  Fix mean-zeros scale
  Make lun2Estimate parallel
  Allow non-interger Lun 2 lib sizes
  Fix dropout eta

From: Luke Zappia <lazappi@users.noreply.github.com>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127511 bc3139a8-67e5-0310-9ffc-ced21a209358

* master:
  Version 0.99.10
  Remove out.loProb from vignette
  Update default Splat parameters
  Remove out.loProb parameter
  Update estimation procedure

From: Luke Zappia <lazappi@users.noreply.github.com>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127213 bc3139a8-67e5-0310-9ffc-ced21a209358

* master:
  Bump version number
  Update scDD reference
  Add addGeneLengths to vignette
  Add addGeneLengths tests
  Add addGeneLengths function
  Update Roxygen version
  Update README
  Add bioc-devel to Travis

From: Luke Zappia <lazappi@users.noreply.github.com>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@126415 bc3139a8-67e5-0310-9ffc-ced21a209358

* master: (123 commits)
  Fix non-linear path factors
  Bump verison number
  Set some examples to not run to save check time
  Initalise scDatEx to avoid NOTE
  Tidy up and bump version
  Replace 1:x
  Remove splatter.Rproj
  Add more detail about counts matrix
  Add installation to vignette
  Set R_TESTS environment
  Bump version to start build
  splatter 0.99.3
  Updata scDDEstimate
  Add condition parameter
  Modify SCDDParams to take SummarizedExperiment
  Add logo to vignettes directory
  Remove scDD github remote
  Update to R-devel
  Address Bioconductor build warnings, notes
  Prepare for Bioconductor submission
  ...

From: Luke Zappia <lazappi@users.noreply.github.com>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@126081 bc3139a8-67e5-0310-9ffc-ced21a209358

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@125902 bc3139a8-67e5-0310-9ffc-ced21a209358