Merge branch 'master' of github.com:Oshlack/splatter

* 'master' of github.com:Oshlack/splatter:
  Turn off release builds
  Tell appveyor to install DelayedArray
  Tell appveyor to install BASiCS...again
  Tell appveyor to install GenomeInfoDb
  Add RTOOLS to appveyor environment
  Remove newSCESet import
  Tell appveyor to install BASiCS
  Add 3.4.0
  Add oldrel
  Add dependencies

.travis.yml

@@ -3,7 +3,7 @@
 language: R
 r:
   - bioc-devel
-  - bioc-release
+#  - bioc-release
 sudo: false
 cache: packages
 

NAMESPACE

@@ -115,7 +115,6 @@ importFrom(methods,new)
 importFrom(methods,slot)
 importFrom(methods,slotNames)
 importFrom(methods,validObject)
-importFrom(scater,newSCESet)
 importFrom(stats,dnbinom)
 importFrom(stats,median)
 importFrom(stats,model.matrix)

R/BASiCS-simulate.R

@@ -27,7 +27,6 @@
 #' @examples
 #' sim <- BASiCSSimulate()
 #' @export
-#' @importFrom scater newSCESet
 BASiCSSimulate <- function(params = newBASiCSParams(), verbose = TRUE, ...) {
 
     checkmate::assertClass(params, "BASiCSParams")

appveyor.yml

@@ -15,11 +15,12 @@ install:
 environment:
     matrix:
     - R_VERSION: devel
-
-    - R_VERSION: release
+#    - R_VERSION: release
+    USE_RTOOLS: true
 
 build_script:
   - travis-tool.sh install_bioc_deps
+  - travis-tool.sh install_bioc GenomeInfoDb DelayedArray BASiCS
 
 test_script:
   - travis-tool.sh run_tests