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Package: splatter
Type: Package
Title: Simple Simulation of Single-cell RNA Sequencing Data
Author: Luke Zappia
Authors@R:
c(person("Luke", "Zappia", role = c("aut", "cre"),
email = "luke.zappia@mcri.edu.au"),
person("Belinda", "Phipson", role = c("aut"),
email = "belinda.phipson@mcri.edu.au"),
person("Alicia", "Oshlack", role = c("aut"),
email = "alicia.oshlack@mcri.edu.au"))
Maintainer: Luke Zappia <luke.zappia@mcri.edu.au>
Description: Splatter is a package for the simulation of single-cell RNA
sequencing count data. It provides a simple interface for creating complex
simulations that are reproducible and well-documented.
License: GPL-3 + file LICENSE
LazyData: TRUE
Depends:
R (>= 3.4),
scater
Imports:
fitdistrplus,
edgeR,
stats,
locfit,
akima,
Biobase,
checkmate,
methods,
utils,
matrixStats,
ggplot2,
Suggests:
testthat,
scran,
progress,
lme4,
pscl,
scDD,
knitr,
rmarkdown,
BiocStyle,
covr,
S4Vectors,
SummarizedExperiment
biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression, Sequencing,
Software
URL: https://github.com/Oshlack/splatter
BugReports: https://github.com/Oshlack/splatter/issues
VignetteBuilder: knitr