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The mice are from what is referred to as a "BC1F1" generation: More specifically previously two inbred mice were crossed from the strains C57BL6 and FVB. The resulting F1 mice were then backcrossed to an FVB inbred, which resulted in the "BC1F1" mice. It is these BC1F1 mice that were sequenced.
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The fastq files, a list of variants, and metadata can be downloaded [here](https://stvincentsinstitute.sharepoint.com/:f:/s/everything/EhsB8UYRrChOiTjyCtUBV-UB1KddW9d0XXKe4SdCzZQr_Q?e=1b0kYd).
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The fastq files, a list of variants, and metadata can be downloaded [here](https://stvincentsinstitute.sharepoint.com/:f:/s/CrismaniData/Ehr5NSEOV-BFl4dWgq8bKrsBmYjCbAlQbDOsEZ9MFFD_Kw?e=vWD06P).
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Fastq files for five mice are provided. Whole genome coverage may be in the range from 1-5x. If this level of coverage is expected to be problematic, please let me know.
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