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count_foci has individual mask routines. More modular and closer to...
count_foci has individual mask routines. More modular and closer to bioconductor standards. Mask routines can be called with different settings for exceptional cases e.g. after removing XY, low background and low signal
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- .DS_Store 0 additions, 0 deletions.DS_Store
- R/count_foci.R 184 additions, 71 deletionsR/count_foci.R
- man/annotate_foci_counting.Rd 2 additions, 5 deletionsman/annotate_foci_counting.Rd
- man/count_foci.Rd 4 additions, 1 deletionman/count_foci.Rd
- man/get_foci_per_cell.Rd 52 additions, 0 deletionsman/get_foci_per_cell.Rd
- man/get_overlap_mask.Rd 32 additions, 0 deletionsman/get_overlap_mask.Rd
- man/make_foci_mask.Rd 34 additions, 0 deletionsman/make_foci_mask.Rd
- man/make_strand_mask.Rd 20 additions, 0 deletionsman/make_strand_mask.Rd
- man/remove_XY.Rd 14 additions, 0 deletionsman/remove_XY.Rd
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