Commit 5dda3c25 authored by Lucy McNeill's avatar Lucy McNeill
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update README front page to reflect function names

parent a3ab0b71
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......@@ -34,7 +34,7 @@ foci_counts <- count_foci(path,offset_factor = 5, brush_size = 1, brush_sigma =
and
```r
df_dist <- measure_distances(path,offset_factor = 5, brush_size = 1, brush_sigma = 1, annotation = "on", WT_out = "Fancm+/+",KO_out = "Fancm-/-", stage = "pachytene")
df_dist <- measure_distances_general(path,offset_factor = 5, brush_size = 1, brush_sigma = 1, annotation = "on", WT_out = "Fancm+/+",KO_out = "Fancm-/-", stage = "pachytene")
```
otherwise, for everything else, you could call something like:
......@@ -45,5 +45,5 @@ foci_counts <- count_foci(path,offset_factor = 5, brush_size = 1, brush_sigma =
and
```r
df_dist <- measure_distances(path,offset_factor = 5, brush_size = 1, brush_sigma = 1, annotation = "on",WT_str = "tif",WT_out ="NA",file_ext = "tif", channel2_string = "c3", channel1_string = "c2", offset_px = 0.4, crowded_foci = TRUE)
df_dist <- measure_distances_general(path,offset_factor = 5, brush_size = 1, brush_sigma = 1, annotation = "on",WT_str = "tif",WT_out ="NA",file_ext = "tif", channel2_string = "c3", channel1_string = "c2", offset_px = 0.4, crowded_foci = TRUE)
```
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