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BioCellGen-public
sirplus
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9046703eeba99a0cc4a8a279119289c5c38b2e44
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Document Splotch simulation functions
Luke Zappia authored
5 years ago
9046703e
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9046703e
5 years ago
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BASiCSEstimate.Rd
BASiCSParams.Rd
BASiCSSimulate.Rd
Lun2Params.Rd
LunParams.Rd
MFAParams.Rd
Params.Rd
PhenoParams.Rd
SCDDParams.Rd
SimpleParams.Rd
SparseDCParams.Rd
SplatParams.Rd
SplotchParams.Rd
ZINBParams.Rd
addFeatureStats.Rd
addGeneLengths.Rd
bridge.Rd
bringItemsForward.Rd
compareSCEs.Rd
diffSCEs.Rd
expandParams.Rd
getBetaStepProbs.Rd
getLNormFactors.Rd
getParam.Rd
getParams.Rd
getPathOrder.Rd
listSims.Rd
logistic.Rd
lun2Estimate.Rd
lun2Simulate.Rd
lunEstimate.Rd
lunSimulate.Rd
makeCompPanel.Rd
makeDiffPanel.Rd
makeOverallPanel.Rd
mfaEstimate.Rd
mfaSimulate.Rd
newParams.Rd
phenoEstimate.Rd
phenoSimulate.Rd
rbindMatched.Rd
sampleDensity.Rd
scDDEstimate.Rd
scDDSimulate.Rd
setParam.Rd
setParamUnchecked.Rd
setParams.Rd
setParamsUnchecked.Rd
showDFs.Rd
showPP.Rd
showValues.Rd
simpleEstimate.Rd
simpleSimulate.Rd
sparseDCEstimate.Rd
sparseDCSimulate.Rd
splatEstBCV.Rd
splatEstDropout.Rd
splatEstLib.Rd
splatEstMean.Rd
splatEstOutlier.Rd
splatEstimate.Rd
splatSimBCVMeans.Rd
splatSimBatchCellMeans.Rd
splatSimBatchEffects.Rd
splatSimCellMeans.Rd
splatSimDE.Rd
splatSimDropout.Rd
splatSimGeneMeans.Rd
splatSimLibSizes.Rd
splatSimTrueCounts.Rd
splatSimulate.Rd
splatter.Rd
splotchEstimate.Rd
splotchGenNetwork.Rd
splotchSample.Rd
splotchSelectRegs.Rd
splotchSetup.Rd
splotchSimAmbientCounts.Rd
splotchSimCellCounts.Rd
splotchSimCellMeans.Rd
splotchSimCounts.Rd
splotchSimGeneMeans.Rd
splotchSimLibSizes.Rd
splotchSimPaths.Rd
splotchSimulate.Rd
summariseDiff.Rd
summariseKS.Rd
summariseStats.Rd
tidyStatSumm.Rd
winsorize.Rd
zinbEstimate.Rd
zinbSimulate.Rd
