Commits · f18261d7d94a31d3f96ac7f26921cfe4a10284e1 · BioCellGen-public / sirplus

Mar 07, 2017
- Update default Splat parameters · a4b858b5
  Luke Zappia authored 8 years ago
  
  a4b858b5
- Remove out.loProb parameter · 20702769
  Luke Zappia authored 8 years ago
  
  Decided it was unnecessary
  20702769
Jan 13, 2017

Adding goSTAG, splatter, karyoploteR, discordant, POST, MCbiclust · 070784c4

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@125902 bc3139a8-67e5-0310-9ffc-ced21a209358

070784c4

Dec 21, 2016
- Updata scDDEstimate · 0ad0c07c
  Luke Zappia authored 8 years ago
  
  0ad0c07c
- Add condition parameter · 0a529c99
  Luke Zappia authored 8 years ago
  
  0a529c99
- Modify SCDDParams to take SummarizedExperiment · 3002d18c
  Luke Zappia authored 8 years ago
  
  3002d18c
Dec 12, 2016

Address Bioconductor build warnings, notes · 9df97dd1

Luke Zappia authored 8 years ago

* Add locfit to NAMESPACE
* Add return values to logistic, showPP documentation
* Delete commented mergeParams function
* Switch to aes_string in compareSCESets
* Add examples to getParam, setParam
* Adjust line lengths
* Adjust indentation

9df97dd1

Oct 25, 2016
- Run checks · 8a739f85
  Luke Zappia authored 8 years ago
  
  8a739f85
Oct 16, 2016
- Add parameters sections · ad6b5294
  Luke Zappia authored 8 years ago
  
  ad6b5294
Oct 15, 2016
- Add scDDSimulate function · 2ab3d0aa
  Luke Zappia authored 8 years ago
  
  2ab3d0aa
- Add scDDEstimate · 8d3058b9
  Luke Zappia authored 8 years ago
  
  8d3058b9
- Add SCDDParams object · 93abc23d
  Luke Zappia authored 8 years ago
  
  93abc23d
- Run checks · a2cc9c83
  Luke Zappia authored 8 years ago
  
  a2cc9c83
- Add lun2Simulate function · 67d88d34
  Luke Zappia authored 8 years ago
  
  67d88d34
Oct 14, 2016
- Document Lun2Params · d36b8dda
  Luke Zappia authored 8 years ago
  
  d36b8dda
- Add Lun2Params object · ad4b95bf
  Luke Zappia authored 8 years ago
  
  ad4b95bf
- Add LunParams object · 3dce282b
  Luke Zappia authored 8 years ago
  
  3dce282b
- Add splatSimulate tests and run checks · db4770a6
  Luke Zappia authored 8 years ago
  
  db4770a6
Oct 13, 2016
- Add splatParams object · 51db1e57
  Luke Zappia authored 8 years ago
  
  51db1e57
- Document new simple simulation · ae2d4a38
  Luke Zappia authored 8 years ago
  
  ae2d4a38
- Add S4 SimpleParams class · bd618942
  Luke Zappia authored 8 years ago
  
  bd618942