Commits · ef4341adc4d166f00902ea7406164ceb08583daf · BioCellGen-public / sirplus

Feb 21, 2020
- fixed error with mean being assigned as Inf if pnorm was = 0 · ef4341ad
  Christina Azodi authored 5 years ago
  
  ef4341ad
Feb 20, 2020
- fix r check bug · 56d2cec4
  Christina Azodi authored 5 years ago
  
  56d2cec4
Feb 14, 2020
- fixing r check errors · 075a5175
  Christina Azodi authored 5 years ago
  
  075a5175
- added eQTLEstimate function and eqtl params as an S4 parameters object · d8f09d03
  Christina Azodi authored 5 years ago
  
  d8f09d03
Feb 11, 2020
- add eQTL parameters S4 object information · e460328a
  Christina Azodi authored 5 years ago
  
  e460328a
- add eQTL parameters S4 object information · 4c64ef37
  Christina Azodi authored 5 years ago
  
  4c64ef37
Feb 04, 2020
- added vcf and gff example data · b3c4d4a0
  Christina Azodi authored 5 years ago
  
  b3c4d4a0
- added vcf and gff example data · fa104838
  Christina Azodi authored 5 years ago
  
  fa104838
- update to use vcf and gff object instead of path · 650060f5
  Christina Azodi authored 5 years ago
  
  650060f5
- update to use vcf and gff object instead of path · 945263d3
  Christina Azodi authored 5 years ago
  
  945263d3
- fixed nGroups not found bug · 6789ac84
  Christina Azodi authored 5 years ago
  
  6789ac84
- fixed nGroups not found bug · 547c1442
  Christina Azodi authored 5 years ago
  
  547c1442
- working version of splateQTL · 1e3c5dc4
  Christina Azodi authored 5 years ago
  
  1e3c5dc4
- working version of splateQTL · 03ca12dc
  Christina Azodi authored 5 years ago
  
  03ca12dc
Jan 28, 2020
- first splat-eqtl commit · b83a034a
  Christina Azodi authored 5 years ago
  
  b83a034a
- first splat-eqtl commit · b30962ed
  Christina Azodi authored 5 years ago
  
  b30962ed
Jan 20, 2020
- testing · b191a274
  Christina Azodi authored 5 years ago
  
  b191a274
- testing · b642ef4d
  Christina Azodi authored 5 years ago
  
  b642ef4d
Oct 19, 2019
- addPer*QC() functions were renamed in scater 1.13.27 · 90c5a7b6
  Hervé Pagès authored 5 years ago
  
  90c5a7b6
- addPer*QC() functions were renamed in scater 1.13.27 · a25de584
  Hervé Pagès authored 5 years ago
  
  a25de584
Oct 11, 2019
- Add missing documentation for sce in getCounts · 12e60887
  Luke Zappia authored 5 years ago
  
  12e60887
- Add missing documentation for sce in getCounts · 5bb38e0d
  Luke Zappia authored 5 years ago
  
  5bb38e0d
- Fix where simpleSimulate stores params · b7a0f902
  Luke Zappia authored 5 years ago
  
  Fixes #72
  b7a0f902
- Fix where simpleSimulate stores params · 99c8b9ac
  Luke Zappia authored 5 years ago
  
  Fixes #72
  99c8b9ac
- Check for counts assay when estimating from SCE · 2258278e
  Luke Zappia authored 5 years ago
  
  Fixes #82
  2258278e
- Check for counts assay when estimating from SCE · d6d7dba6
  Luke Zappia authored 5 years ago
  
  Fixes #82
  d6d7dba6
- Check spelling · 96e03d87
  Luke Zappia authored 5 years ago
  
  96e03d87
- Check spelling · 39b5b2a7
  Luke Zappia authored 5 years ago
  
  39b5b2a7
- Run checks · 644e6d84
  Luke Zappia authored 5 years ago
  
  644e6d84
- Run checks · 55145cca
  Luke Zappia authored 5 years ago
  
  55145cca
Oct 10, 2019
- Rename Splotch to Kersplat · bf41552b
  Luke Zappia authored 5 years ago
  
  bf41552b
- Rename Splotch to Kersplat · 4462511d
  Luke Zappia authored 5 years ago
  
  4462511d
- Add Splotch to listSims · b598f16f
  Luke Zappia authored 5 years ago
  
  b598f16f
- Add Splotch to listSims · d32da886
  Luke Zappia authored 5 years ago
  
  d32da886
- Document Splotch estimation functions · 33fc6396
  Luke Zappia authored 5 years ago
  
  33fc6396
- Document Splotch estimation functions · 66435625
  Luke Zappia authored 5 years ago
  
  66435625
Oct 09, 2019
- Document Splotch simulation functions · 3370996d
  Luke Zappia authored 5 years ago
  
  3370996d
- Document Splotch simulation functions · 9046703e
  Luke Zappia authored 5 years ago
  
  9046703e
Oct 01, 2019

Luke Zappia authored 5 years ago

* Change default cells.design to end of path
* Add experimental warning
* Avoid resetting cells.design

5141747e

Minor Splotch changes · 22c49d09

Luke Zappia authored 5 years ago

* Change default cells.design to end of path
* Add experimental warning
* Avoid resetting cells.design

22c49d09