- Jan 30, 2018
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
* 'master' of github.com:Oshlack/splatter: Turn off release builds Tell appveyor to install DelayedArray Tell appveyor to install BASiCS...again Tell appveyor to install GenomeInfoDb Add RTOOLS to appveyor environment Remove newSCESet import Tell appveyor to install BASiCS Add 3.4.0 Add oldrel Add dependencies
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Luke Zappia authored
Fix appveyor
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
* master: (120 commits) Fix vignette error Bump version number add back libgsl-dev, if zinbwave is to be installed also install suggested packages on travis in order to be able to run all tests and examples moving zinbwave to suggests and removing apt installation of gsl Fix zinbwave installation error Bioconductor 3.6 release add back all checks remove comma temporarily reduce build time added apt-get dependency for zinbwave Add zimbwave to imports bump x.y.z versions to odd y after creation of RELEASE_3_6 branch bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch Version 1.1.8 Update lun2 reference Update citation Add BASiCS to lists Run checks Convert to SingleCellExperiment ...
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- Jan 03, 2018
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Luke Zappia authored
* 'master' of git.bioconductor.org:packages/splatter: bump x.y.z versions to odd y after creation of RELEASE_3_6 branch
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Luke Zappia authored
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- Nov 23, 2017
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Luke Zappia authored
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Luke Zappia authored
* 'master' of github.com:Oshlack/splatter: add back libgsl-dev, if zinbwave is to be installed also install suggested packages on travis in order to be able to run all tests and examples moving zinbwave to suggests and removing apt installation of gsl add back all checks remove comma temporarily reduce build time added apt-get dependency for zinbwave Add zimbwave to imports
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Luke Zappia authored
Fix travis testing
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- Nov 22, 2017
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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Luke Zappia authored
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Luke Zappia authored
* RELEASE_3_6: bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch
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- Nov 21, 2017
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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Robrecht Cannoodt authored
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- Nov 20, 2017
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Wouter Saelens authored
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- Oct 31, 2017
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Hervé Pagès authored
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Hervé Pagès authored
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- Oct 13, 2017
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
* basics: Add BASiCS to lists Run checks Convert to SingleCellExperiment Fix lun2Estimate error Fix lun2Estimate error Fix default MCMC iterations Add estimation without spike-ins Set default MCMC iterations Update BASiCSParams print method Add BASiCS to listSims Add require check to newBASiCSParams Add BASiCSEstimate Updata BASiCSParams docs Add batches to BASiCSSimulate Add batch parameters Add BASiCSSimulate function Add nSpikes parameter Add BASiCSParams tests Add BASiCSParams class
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Luke Zappia authored
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Luke Zappia authored
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Luke Zappia authored
- Oct 12, 2017
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Luke Zappia authored
* master: (50 commits) Run checks and bump version Add ZINB-WaVE simulation to lists Convert mfaSimulate output to counts Convert phenoSimulate output to counts Add zinbEstimate Add zinbSimulate Adjust ZINBParams defaults Add ZINBParams tests Add ZINBParams Add pheno to lists Add phenoEstimate Add phenoSimulate Add PhenoParams Fix quotes bug in tests Bump version Add mfa tests Run checks Add mfa to lists Add mfaSimulate Add mfaEstimate ...
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- Oct 05, 2017
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