Commits · 7378a1aa0194a57586ff1f52a80f540313551f23 · BioCellGen-public / sirplus

Mar 03, 2020
- added testthat tests for eQTL functions · 7378a1aa
  Christina Azodi authored 5 years ago
  
  7378a1aa
Feb 04, 2020
- fixed nGroups not found bug · 6789ac84
  Christina Azodi authored 5 years ago
  
  6789ac84
- fixed nGroups not found bug · 547c1442
  Christina Azodi authored 5 years ago
  
  547c1442
- working version of splateQTL · 1e3c5dc4
  Christina Azodi authored 5 years ago
  
  1e3c5dc4
- working version of splateQTL · 03ca12dc
  Christina Azodi authored 5 years ago
  
  03ca12dc
Oct 11, 2019
- Run checks · 644e6d84
  Luke Zappia authored 5 years ago
  
  644e6d84
- Run checks · 55145cca
  Luke Zappia authored 5 years ago
  
  55145cca
Apr 18, 2019
- Add Splat parameters vignette · ff7f4ab7
  Luke Zappia authored 5 years ago
  
  Fix spelling
  View commits for tag v1.7.5 v1.7.5
  
  ff7f4ab7
- Add Splat parameters vignette · 9657ff62
  Luke Zappia authored 5 years ago
  
  Fix spelling
  9657ff62
- Rename path.length to path.nSteps · 85748884
  Luke Zappia authored 5 years ago
  
  85748884
- Rename path.length to path.nSteps · 426139b9
  Luke Zappia authored 5 years ago
  
  426139b9
Apr 15, 2019
- Fix splatSimulate group order · 6be78728
  Luke Zappia authored 5 years ago
  
  Fixes #66 Groups (and paths) were being simulted in alphanumeric rather than number order. Fixed by making the Group column a factor.
  View commits for tag v1.7.3 v1.7.3
  
  6be78728
- Fix splatSimulate group order · 60964a07
  Luke Zappia authored 5 years ago
  
  Fixes #66 Groups (and paths) were being simulted in alphanumeric rather than number order. Fixed by making the Group column a factor.
  60964a07
- Protect against integer overflow in sim functions · aac2b5d4
  Luke Zappia authored 5 years ago
  
  Fixes #49
  aac2b5d4
- Protect against integer overflow in sim functions · bf2acc32
  Luke Zappia authored 5 years ago
  
  Fixes #49
  bf2acc32
- Minor changes to documentation · 4ff20b74
  Luke Zappia authored 5 years ago
  
  Fixes #64 Also remove lingering references to phenoData and featureData
  4ff20b74
- Minor changes to documentation · 5e9caa07
  Luke Zappia authored 5 years ago
  
  Fixes #64 Also remove lingering references to phenoData and featureData
  5e9caa07
Jun 21, 2018
- Fix bug in reversing directions for factors less than one · 92c2194a
  Allen Zhang authored 6 years ago
  
  92c2194a
- Fix bug in reversing directions for factors less than one · 9f878160
  Allen Zhang authored 6 years ago
  
  9f878160
Jun 12, 2018
- Fix typo in message · 9d454224
  Luke Zappia authored 6 years ago
  
  9d454224
- Fix typo in message · 32d59d42
  Luke Zappia authored 6 years ago
  
  32d59d42
Apr 19, 2018
- Rename params metadata to Params for consistency · ca89af6f
  Luke Zappia authored 6 years ago
  
  ca89af6f
- Rename params metadata to Params for consistency · 7a27b68d
  Luke Zappia authored 6 years ago
  
  7a27b68d
Apr 18, 2018
- Simplify problematic doc links · 9ee58e44
  Luke Zappia authored 6 years ago
  
  9ee58e44
- Simplify problematic doc links · e21d26b2
  Luke Zappia authored 6 years ago
  
  e21d26b2
Apr 13, 2018
- Run checks · 5380fa9f
  Luke Zappia authored 6 years ago
  
  5380fa9f
- Run checks · 78dc86d0
  Luke Zappia authored 6 years ago
  
  78dc86d0
- Add lib.norm to splatSimulate · a9e20382
  Luke Zappia authored 6 years ago
  
  a9e20382
- Add lib.norm to splatSimulate · b37e35c3
  Luke Zappia authored 6 years ago
  
  b37e35c3
Apr 12, 2018
- Add group as a dropout.type option · 07cc2a34
  Luke Zappia authored 6 years ago
  
  07cc2a34
- Add group as a dropout.type option · 0b9bcc33
  Luke Zappia authored 6 years ago
  
  0b9bcc33
- Add dropout.type to splatSimulate · d09b2635
  Luke Zappia authored 6 years ago
  
  d09b2635
- Add dropout.type to splatSimulate · 5e1e826e
  Luke Zappia authored 6 years ago
  
  5e1e826e
Oct 13, 2017
- Update citation · b5fed63d
  Luke Zappia authored 7 years ago
  
  b5fed63d
Sep 13, 2017
- Run checks · bce9b2ce
  Luke Zappia authored 7 years ago
  
  bce9b2ce
- Fix error in simulating batches · 7724df73
  Luke Zappia authored 7 years ago
  
  Problem using factor to index matrix
  7724df73
Sep 07, 2017
- Update simulation documentation · e1de64de
  Luke Zappia authored 7 years ago
  
  e1de64de
- Convert simulations to SingleCellExperiment · 572667ad
  Luke Zappia authored 7 years ago
  
  572667ad
Aug 04, 2017

Merge branch 'master' into devel · 61e88c6e

Luke Zappia authored 7 years ago

* master:
  Fix group factors bug

From: Luke Zappia <lazappi@users.noreply.github.com>

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@131740 bc3139a8-67e5-0310-9ffc-ced21a209358

61e88c6e

Fix group factors bug · e5402c4c
Luke Zappia authored 7 years ago

e5402c4c