Commits · 52ee147c411206e485683b4731ee3331d2be92dc · BioCellGen-public / sirplus · GitLab

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Mar 25, 2020
- small bug · 8b9f2673
  Christina Azodi authored 5 years ago
  
  8b9f2673
- added SIR plots for single and multiple experiments · d770fab9
  Christina Azodi authored 5 years ago
  
  d770fab9
- plots for distributions · 5c9d1f79
  Christina Azodi authored 5 years ago
  
  5c9d1f79
- adding ploting function · 425dce6b
  Christina Azodi authored 5 years ago
  
  425dce6b
Mar 24, 2020
- working simulation · 47e2563b
  pqiao29 authored 5 years ago
  
  47e2563b
- .. · 592390f7
  pqiao29 authored 5 years ago
  
  592390f7
- moved params into own function file · 3f56064e
  Christina Azodi authored 5 years ago
  
  3f56064e
- fix set.control · 3b76a177
  pqiao29 authored 5 years ago
  
  3b76a177
- fix bug with calling control.icm · b4070853
  Christina Azodi authored 5 years ago
  
  b4070853
- fix bug with init and param not finding function · 452afbb4
  Christina Azodi authored 5 years ago
  
  452afbb4
- update description and namespace · 65058422
  Christina Azodi authored 5 years ago
  
  65058422
- removed splatter files · cb2c845e
  Christina Azodi authored 5 years ago
  
  cb2c845e
Mar 04, 2020
- added eQTL to vignette · efd6d659
  Christina Azodi authored 5 years ago
  
  efd6d659
Feb 04, 2020
- removed weird HEADER tags in vig rmd files · 5afe4d4c
  Christina Azodi authored 5 years ago
  
  5afe4d4c
- removed weird HEADER tags in vig rmd files · 6913b86b
  Christina Azodi authored 5 years ago
  
  6913b86b
Jan 31, 2020
- Update scater functions in vignette · 083be7cc
  Luke Zappia authored 5 years ago
  
  083be7cc
- Update scater functions in vignette · b00bd989
  Luke Zappia authored 5 years ago
  
  b00bd989
Jan 20, 2020
- updated normalize to logNormCounts · 94aab2d1
  Christina Azodi authored 5 years ago
  
  94aab2d1
- updated normalize to logNormCounts · 3d652545
  Christina Azodi authored 5 years ago
  
  3d652545
Oct 11, 2019
- Check spelling · 96e03d87
  Luke Zappia authored 5 years ago
  
  96e03d87
- Check spelling · 39b5b2a7
  Luke Zappia authored 5 years ago
  
  39b5b2a7
- Run checks · 644e6d84
  Luke Zappia authored 5 years ago
  
  644e6d84
- Run checks · 55145cca
  Luke Zappia authored 5 years ago
  
  55145cca
Aug 20, 2019
- Replace sc_example_counts with mockSCE() · d1fb46dc
  Luke Zappia authored 5 years ago
  
  Tidy and improve examples
  d1fb46dc
- Replace sc_example_counts with mockSCE() · 55794d07
  Luke Zappia authored 5 years ago
  
  Tidy and improve examples
  55794d07
Aug 08, 2019
- Remove deprecated scater functions · 8dcb671c
  Luke Zappia authored 5 years ago
  
  Still some warnings from BASiCS...
  8dcb671c
- Remove deprecated scater functions · 8276db58
  Luke Zappia authored 5 years ago
  
  Still some warnings from BASiCS...
  8276db58
Apr 18, 2019
- Add Splat parameters vignette · ff7f4ab7
  Luke Zappia authored 5 years ago
  
  Fix spelling
  View commits for tag v1.7.5 v1.7.5
  
  ff7f4ab7
- Add Splat parameters vignette · 9657ff62
  Luke Zappia authored 5 years ago
  
  Fix spelling
  9657ff62
- Rename path.length to path.nSteps · 85748884
  Luke Zappia authored 5 years ago
  
  85748884
- Rename path.length to path.nSteps · 426139b9
  Luke Zappia authored 5 years ago
  
  426139b9
Apr 15, 2019
- Minor changes to documentation · 4ff20b74
  Luke Zappia authored 5 years ago
  
  Fixes #64 Also remove lingering references to phenoData and featureData
  4ff20b74
- Minor changes to documentation · 5e9caa07
  Luke Zappia authored 5 years ago
  
  Fixes #64 Also remove lingering references to phenoData and featureData
  5e9caa07
Nov 17, 2018
- Fix bugs in vignette · 1d2175fe
  Luke Zappia authored 6 years ago
  
  scater normalise renamed to normalize
  View commits for tag v1.7.1 v1.7.1
  
  1d2175fe
- Fix bugs in vignette · c04134de
  Luke Zappia authored 6 years ago
  
  scater normalise renamed to normalize
  c04134de
Aug 31, 2018
- replace BiocInstaller biocLite mentions with BiocManager · bab7e299
  LiNk-NY authored 6 years ago
  
  bab7e299
- replace BiocInstaller biocLite mentions with BiocManager · 124ee9c0
  LiNk-NY authored 6 years ago
  
  124ee9c0
Aug 16, 2018
- Fix variable name to be compatible with scater · c77ddc9a
  Luke Zappia authored 6 years ago
  
  c77ddc9a
- Fix variable name to be compatible with scater · a2c67b3f
  Luke Zappia authored 6 years ago
  
  a2c67b3f
Apr 13, 2018
- Run checks · 5380fa9f
  Luke Zappia authored 6 years ago
  
  5380fa9f