Commits · 445db2d82e2a9bc6a6fb9b90b2cf5cf81ec5d97d · BioCellGen-public / sirplus

Jan 13, 2017

Adding goSTAG, splatter, karyoploteR, discordant, POST, MCbiclust · 070784c4

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@125902 bc3139a8-67e5-0310-9ffc-ced21a209358

070784c4

Dec 28, 2016
- Set R_TESTS environment · db29731d
  Luke Zappia authored 8 years ago
  
  Hopefully fixes error when building on windows
  View commits for tag v0.99.5 v0.99.5
  
  db29731d
Oct 15, 2016
- Add scDD tests · a42818a6
  Luke Zappia authored 8 years ago
  
  a42818a6
- Document lun2Simulate and add tests · 443149ca
  Luke Zappia authored 8 years ago
  
  443149ca
Oct 14, 2016
- Add Lun2Params object · ad4b95bf
  Luke Zappia authored 8 years ago
  
  ad4b95bf
- Add extra tests · c09254f4
  Luke Zappia authored 8 years ago
  
  c09254f4
- Add lunSimulate tests and run checks · 303d1259
  Luke Zappia authored 8 years ago
  
  303d1259
- Add splatSimulate tests and run checks · db4770a6
  Luke Zappia authored 8 years ago
  
  db4770a6
Oct 13, 2016
- Add splatParams object · 51db1e57
  Luke Zappia authored 8 years ago
  
  51db1e57
- Run checks · e28ab574
  Luke Zappia authored 8 years ago
  
  e28ab574
Oct 12, 2016
- Add DE to simLun · 8401d1e6
  Luke Zappia authored 8 years ago
  
  8401d1e6
- Add addition Lun params to splatParams · 4b6b0d5b
  Luke Zappia authored 8 years ago
  
  4b6b0d5b
- Add basic simLun function · 92e0abd0
  Luke Zappia authored 8 years ago
  
  92e0abd0
- Add tests for simple simulation · 59f702e2
  Luke Zappia authored 8 years ago
  
  59f702e2
- Add simSimple function · 7a4b16af
  Luke Zappia authored 8 years ago
  
  7a4b16af
- Test that splat output is a valid SCESet · bf373c55
  Luke Zappia authored 8 years ago
  
  bf373c55
- Add single mode to splat · 53246012
  Luke Zappia authored 8 years ago
  
  53246012
Oct 11, 2016
- Add seed paramater and seed simulation · 83837f38
  Luke Zappia authored 8 years ago
  
  83837f38
- Run checks · 5321991b
  Luke Zappia authored 8 years ago
  
  5321991b
Oct 10, 2016
- Add extra checks checkParams · 2fb13ced
  Luke Zappia authored 8 years ago
  
  Check that path.from has possible values
  2fb13ced
Oct 07, 2016
- Add nGroups to splatParams · 2d741c7e
  Luke Zappia authored 8 years ago
  
  2d741c7e
Oct 06, 2016
- Add test-params · 1609583c
  Luke Zappia authored 8 years ago
  
  Fix some bugs along the way
  1609583c
Oct 05, 2016
- Add extra infrastructure · 35ed08d6
  Luke Zappia authored 8 years ago
  
  35ed08d6