- Apr 14, 2017
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Luke Zappia authored
* master: Version 0.99.15 Remove dropout.present estimation Add limits to zeros plots Adjust default splat DE fac params Add BPPARAM to scDDSimulate Add summariseDiff function From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@128698 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Mar 28, 2017
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Luke Zappia authored
* master: Version 0.99.14 Add panel function to vignette Change var plot scale Run checks Update panel functions Add makeOverallPanel function Add makeDiffPanel function Add options to comparison plots From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127789 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Mar 25, 2017
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Luke Zappia authored
* master: Version 0.99.13 Run checks Update Lun2 documentation Modify Lun2Params to use data.frame From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127694 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Mar 22, 2017
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Luke Zappia authored
* master: Version 0.99.12 Run checks Warn if bcv.df is infinite Update addFeatureStats col names Update progress message Switch to boxplots in compareSCESets Change Lun2 nGenes estimate Add diffSCESets to vignette Add diffSCESets function From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127605 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Mar 20, 2017
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Luke Zappia authored
* master: Version 0.99.11 Run checks Fix mean-zeros scale Make lun2Estimate parallel Allow non-interger Lun 2 lib sizes Fix dropout eta From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@127511 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Feb 02, 2017
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Luke Zappia authored
* master: Bump version number Update scDD reference Add addGeneLengths to vignette Add addGeneLengths tests Add addGeneLengths function Update Roxygen version Update README Add bioc-devel to Travis From: Luke Zappia <lazappi@users.noreply.github.com> git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@126415 bc3139a8-67e5-0310-9ffc-ced21a209358
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- Jan 13, 2017
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Martin Morgan authored
git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/splatter@125902 bc3139a8-67e5-0310-9ffc-ced21a209358
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