Commits · 17561692357c5405f2ec0bbdccce1c383bcb4e19 · BioCellGen-public / sirplus

Oct 31, 2018
- bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch · 17561692
  vobencha authored 6 years ago
  
  17561692
Oct 29, 2018
- Update NEWS for Bioc 3.8 Release · 3bf4400c
  Luke Zappia authored 6 years ago
  
  3bf4400c
Oct 22, 2018
- Add WithSpike when calling BASiCS_MCMC · f120b2bb
  Luke Zappia authored 6 years ago
  
  f120b2bb
Oct 03, 2018
- Merge branch 'master' of git.bioconductor.org:packages/splatter · 08b42181
  Luke Zappia authored 6 years ago
  
  * 'master' of git.bioconductor.org:packages/splatter: remove useDevel mention Clean up use of biocLite & add BiocManager to Suggests field
  08b42181
- Fix BASiSCEstimate tests · 9627c3b2
  Luke Zappia authored 6 years ago
  
  9627c3b2
- Fix BASiCSEstimate tests · ab98a13d
  Luke Zappia authored 6 years ago
  
  ab98a13d
Sep 08, 2018
- remove useDevel mention · b4506c85
  LiNk-NY authored 6 years ago
  
  b4506c85
Sep 07, 2018
- Clean up use of biocLite & add BiocManager to Suggests field · 4f90677e
  Hervé Pagès authored 6 years ago
  
  4f90677e
Sep 03, 2018
- Fix installation instructions · 369e7fda
  Luke Zappia authored 6 years ago
  
  369e7fda
- Merge branch 'master' of git.bioconductor.org:packages/splatter · bf6eebe8
  Luke Zappia authored 6 years ago
  
  * 'master' of git.bioconductor.org:packages/splatter: replace BiocInstaller biocLite mentions with BiocManager
  bf6eebe8
Aug 31, 2018
- replace BiocInstaller biocLite mentions with BiocManager · 124ee9c0
  LiNk-NY authored 6 years ago
  
  124ee9c0
Aug 20, 2018
- Build site · 79ff2181
  Luke Zappia authored 6 years ago
  
  79ff2181
- Merge branch 'RELEASE_3_7' · ca793255
  Luke Zappia authored 6 years ago
  
  * RELEASE_3_7: Fix bug in BASiCSEstimate when no spikes
  ca793255
- Fix bug in BASiCSEstimate when no spikes · dba6c49c
  Luke Zappia authored 6 years ago
  
  dba6c49c
- Fix bug in BASiCSEstimate when no spikes · 1eebe229
  Luke Zappia authored 6 years ago
  
  1eebe229
Aug 16, 2018
- Merge branch 'RELEASE_3_7' · 659c4b55
  Luke Zappia authored 6 years ago
  
  * RELEASE_3_7: Bump version to 1.4.2 Add regression parameter to BASiCSEstimate
  659c4b55
- Bump version to 1.4.2 · daa1baaf
  Luke Zappia authored 6 years ago
  
  daa1baaf
- Add regression parameter to BASiCSEstimate · 8cf29fcf
  Luke Zappia authored 6 years ago
  
  Also add new BASiCS tests
  8cf29fcf
- Add regression parameter to BASiCSEstimate · d337c0ec
  Luke Zappia authored 6 years ago
  
  Also add new BASiCS tests
  d337c0ec
- Bump version number · 49025cdb
  Luke Zappia authored 6 years ago
  
  49025cdb
- Add suggested package checks to tests · fe7f23df
  Luke Zappia authored 6 years ago
  
  Fixes #56
  fe7f23df
- Fix variable name to be compatible with scater · a2c67b3f
  Luke Zappia authored 6 years ago
  
  a2c67b3f
- Update Roxygen version · 45c4bea0
  Luke Zappia authored 6 years ago
  
  45c4bea0
Jun 27, 2018
- Merge branch 'master' of github.com:Oshlack/splatter · e70cf190
  Luke Zappia authored 6 years ago
  
  * 'master' of github.com:Oshlack/splatter: Fix bug in reversing directions for factors less than one
  e70cf190
- Merge pull request #51 from Irrationone/master · 3a3f8144
  Luke Zappia authored 6 years ago
  
  Fix bug in reversing directions for factors less than one
  3a3f8144
Jun 21, 2018
- Fix bug in reversing directions for factors less than one · 9f878160
  Allen Zhang authored 6 years ago
  
  9f878160
Jun 12, 2018
- Build pkgdown docs · 259e3544
  Luke Zappia authored 6 years ago
  
  259e3544
- Merge branch 'RELEASE_3_7' · d5d458ec
  Luke Zappia authored 6 years ago
  
  * RELEASE_3_7: Fix errors in splatEstLib normality test
  d5d458ec
- Fix errors in splatEstLib normality test · a53f172a
  Luke Zappia authored 6 years ago
  
  Fixes #48
  a53f172a
- Fix errors in splatEstLib normality test · cb68cd74
  Luke Zappia authored 6 years ago
  
  Fixes #48
  cb68cd74
- Fix typo in message · 32d59d42
  Luke Zappia authored 6 years ago
  
  32d59d42
May 02, 2018
- Bump bioc devel version · 0ca7f716
  Luke Zappia authored 6 years ago
  
  0ca7f716
- Bump bioc release version · 582932aa
  Luke Zappia authored 6 years ago
  
  582932aa
- Merge remote-tracking branch 'upstream/master' · b1023bc7
  Luke Zappia authored 6 years ago
  
  * upstream/master: bump x.y.z versions to odd y after creation of RELEASE_3_7 branch bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch
  b1023bc7
May 01, 2018
- bump x.y.z versions to odd y after creation of RELEASE_3_7 branch · bc1dae7c
  vobencha authored 6 years ago
  
  bc1dae7c
- bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch · 4323a092
  vobencha authored 6 years ago
  
  4323a092
Apr 30, 2018
- Fix logo in README · 5b5e4f71
  Luke Zappia authored 6 years ago
  
  5b5e4f71
- Set seed in sparseDCEstimate tests and bump ver · cd579979
  Luke Zappia authored 6 years ago
  
  These would sometimes error due to sampling of example dataset
  cd579979
Apr 25, 2018

Bump version to 1.3.5 · 83538788
Luke Zappia authored 6 years ago

83538788

Luke Zappia authored 6 years ago

* dropout:
  Use development version
  Run checks
  Add group as a dropout.type option
  Add dropout.type tests
  Add dropout.type to splatSimulate
  Change dropout.present to dropout.type

626bbb9c