S3 in progress: control_seiqhrf, init_seiqhrf, param_seiqhrf, as.data.frame.seiqhrf, print(control, init, param, model), usage in vignette v2

clean up recovery.FUN: till line 117 in revised (recovery.FUN) and line 192 in original (progress.seiqhrf.icm)

Fixes #82

Fixes #82

Tidy and improve examples

Tidy and improve examples

Fixes #69

Checks for SpatParams caused errors if parameters weren't supplied in the right
order. Fixed by making setParams a method and reordering the update list
before setting parameters.

Fixes #69

Checks for SpatParams caused errors if parameters weren't supplied in the right
order. Fixed by making setParams a method and reordering the update list
before setting parameters.

Fixes #64

Also remove lingering references to phenoData and featureData

Fixes #64

Also remove lingering references to phenoData and featureData