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Commit 6793b026 authored by Puxue Qiao's avatar Puxue Qiao
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codecov badge from gitHub

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......@@ -48,15 +48,6 @@ unittests:
- r -e 'if (any(as.data.frame(devtools::test())[["failed"]] > 0)) stop("Some tests failed.")'
codecov:
tags:
- docker
image: pqiao/sirplus_dev
stage: test
script:
- R -e 'covr::gitlab()'
#- R -e 'covr::package_coverage(type = c("tests", "examples"))'
install:
tags:
......
# sirplus
<!-- badges: start -->
[![Codecov test coverage](https://codecov.io/gh/pqiao29/sirplus/branch/master/graph/badge.svg)](https://codecov.io/gh/pqiao29/sirplus?branch=master)
[![pipeline status](https://gitlab.svi.edu.au/biocellgen-private/sirplus/badges/master/pipeline.svg)](https://gitlab.svi.edu.au/biocellgen-private/sirplus/-/commits/master)
<!-- badges: end -->
sirplus is a package for the modeling of COVID-19 spread using stochastic individual compartment models (ICMs). The model implemented extends the classical Susceptible-Infectious-Recovered (SIR) model by adding compartments for Exposed, Quarantined, Hospitalised and Case Fatality individuals. The package provides a simple interface for creating experiments to demonstrate how factors like social-distancing and epidemiological parameters will change the curve.
## Installation and vignette
......
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