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Commit 0d01915a authored by Luke Zappia's avatar Luke Zappia
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Version 0.99.14

parent 06b8cbca
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Package: splatter Package: splatter
Type: Package Type: Package
Title: Simple Simulation of Single-cell RNA Sequencing Data Title: Simple Simulation of Single-cell RNA Sequencing Data
Version: 0.99.13 Version: 0.99.14
Date: 2017-03-25 Date: 2017-03-28
Author: Luke Zappia Author: Luke Zappia
Authors@R: Authors@R:
c(person("Luke", "Zappia", role = c("aut", "cre"), c(person("Luke", "Zappia", role = c("aut", "cre"),
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# 0.99.14
* Add functions for making comparison panels
* Add panel section to vignette
* Change variance plot scale (for consistency)
# 0.99.13 # 0.99.13
* Modify how Lun2Params stores gene paramters to use data.frame * Modify how Lun2Params stores gene paramters to use data.frame
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...@@ -109,7 +109,6 @@ compareSCESets <- function(sces, point.size = 0.1, point.alpha = 0.1, ...@@ -109,7 +109,6 @@ compareSCESets <- function(sces, point.size = 0.1, point.alpha = 0.1,
colour = "Dataset")) + colour = "Dataset")) +
#geom_violin(draw_quantiles = c(0.25, 0.5, 0.75)) + #geom_violin(draw_quantiles = c(0.25, 0.5, 0.75)) +
geom_boxplot() + geom_boxplot() +
scale_y_log10(labels = scales::comma) +
scale_colour_manual(values = colours) + scale_colour_manual(values = colours) +
ylab(expression(paste("Variance ", log[2], "(CPM + 1)"))) + ylab(expression(paste("Variance ", log[2], "(CPM + 1)"))) +
ggtitle("Distribution of variance") + ggtitle("Distribution of variance") +
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