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  • Luke Zappia's avatar
    888cbf78
    Merge branch 'simulate' · 888cbf78
    Luke Zappia authored
    * simulate: (22 commits)
      Test that splat output is a valid SCESet
      Add single mode to splat
      Allow different DE parameters for each group/path
      Add progress messages
      Add seed paramater and seed simulation
      Rename n.genes, n.cells, n.groups for consistency
      Modify outlier expression to use median
      Run checks
      Add simulation documentation
      Add simPathCellMeans function
      Add expandPathParms function
      Add simPathDE function
      Add extra checks checkParams
      Fix bug in mergeParams
      Add simDropout function
      Add simTrueCount function
      Add simBCVMeans function
      Add simGroupCellMeans function
      Add simulateLibSizes function
      Add simulateDE function
      ...
    888cbf78
    History
    Merge branch 'simulate'
    Luke Zappia authored
    * simulate: (22 commits)
      Test that splat output is a valid SCESet
      Add single mode to splat
      Allow different DE parameters for each group/path
      Add progress messages
      Add seed paramater and seed simulation
      Rename n.genes, n.cells, n.groups for consistency
      Modify outlier expression to use median
      Run checks
      Add simulation documentation
      Add simPathCellMeans function
      Add expandPathParms function
      Add simPathDE function
      Add extra checks checkParams
      Fix bug in mergeParams
      Add simDropout function
      Add simTrueCount function
      Add simBCVMeans function
      Add simGroupCellMeans function
      Add simulateLibSizes function
      Add simulateDE function
      ...
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