update dockerfile

Dockerfile

@@ -67,9 +67,13 @@ RUN \
 ENV HTSLIB=system
 ENV PATH=$PATH:~/.cargo/bin/
 
-ADD . /src/
+RUN
+    git clone https://gitlab.svi.edu.au/biocellgen-public/sgcocaller.git && \
+    cd sgcocaller && \
+    nimble install .
+#ADD . /src/
 
-RUN nimble install -y https://gitlab.svi.edu.au/biocellgen-public/sgcocaller.git
+#RUN nimble install -y https://gitlab.svi.edu.au/biocellgen-public/sgcocaller.git
 
 #RUN ls ~/.nimble/lib/
 ENV LD_LIBRARY_PATH=:/root/.nimble/lib/:/usr/local/lib/:$LD_LIBRARY_PATH