Remove edgeR covariate option from benchmarking

code/method-pars.R

@@ -33,10 +33,9 @@ lm_pars <- expand_grid(
 
 edger_pars <- expand_grid(
   method = "edger",
-  fit_method = c("ql", "glm"),
-  covariate = c("cdr", "none")
+  fit_method = c("ql", "glm")
 ) %>%
-  mutate(file_name = paste0(method, "_", fit_method, "_", covariate))
+  mutate(file_name = paste0(method, "_", fit_method))
 
 limma_pars <- expand_grid(
   method = "limma",