From 6b120d5cf4c2f41fd2147840d9ad5c1dd90010b5 Mon Sep 17 00:00:00 2001 From: rlyu <rlyu@svi.edu.au> Date: Tue, 2 Mar 2021 16:53:19 +1100 Subject: [PATCH] update readme --- README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/README.md b/README.md index c780708..1d64227 100644 --- a/README.md +++ b/README.md @@ -2,7 +2,7 @@ `sscocaller` processes DNA reads from each single sperm in the aligned and sorted BAM file for detecting crossovers by identifying haplotype shifts. It takes the large bam file which contains aligned DNA reads from a list of single sperm cells and summarizes allele counts for the provided informative SNP markers. A HMM model is applied for haplotyping each sperm and viterbi algorithm is run for deriving the inferred haplotype sequence against the list of SNP markers. -[sscocaller_fig](images/sscocaller_fig.png) + ## Inputs -- GitLab