context("SCDDParams") if (requireNamespace("scDD", quietly = TRUE)) { params <- newSCDDParams() } test_that("constructor is valid", { skip_if_not_installed("scDD") expect_true(validObject(params)) }) test_that("printing works", { skip_if_not_installed("scDD") expect_output(show(params), "A Params object of class SCDDParams") }) test_that("nGenes checks work", { skip_if_not_installed("scDD") expect_error(setParam(params, "nGenes", 1), paste("nGenes cannot be set directly, set nDE, nDP, nDM, nDB,", "nEE or nEP instead")) pp <- setParam(params, "nEE", 0) total <- getParam(pp, "nDE") + getParam(pp, "nDP") + getParam(pp, "nDM") + getParam(pp, "nDP") + getParam(pp, "nEE") + getParam(pp, "nEP") expect_equal(getParam(pp, "nGenes"), total) })