diff --git a/.travis.yml b/.travis.yml index b405991321f9c3288f48e071911e38f31b0b2cb1..f9364be4143569c62ed08e45d4305f378ec6b347 100644 --- a/.travis.yml +++ b/.travis.yml @@ -7,6 +7,16 @@ r: sudo: false cache: packages +# dependency for gsl>copula>zinbwave +addons: + apt: + packages: + - libgsl-dev + +install: + - R -e 'install.packages("devtools")' + - R -e 'devtools::install(dependencies = TRUE, upgrade_dependencies = TRUE)' + after_success: - Rscript -e 'covr::codecov()' diff --git a/DESCRIPTION b/DESCRIPTION index 4d977fa8dc3f0775a8cc208e3f22d82d54bbacc3..df9d09dcd2d9040b7e8717f30710aace59abad50 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -54,8 +54,8 @@ Suggests: scran, mfa, phenopath, - zinbwave, - BASiCS + BASiCS, + zinbwave biocViews: SingleCell, RNASeq, Transcriptomics, GeneExpression, Sequencing, Software URL: https://github.com/Oshlack/splatter