diff --git a/DESCRIPTION b/DESCRIPTION index b90e1509d71e9e7186d73f23ae083d7f221fa022..5fcd5d046d98fd31b5c08b15bb48e1651d671289 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -1,8 +1,8 @@ Package: splatter Type: Package Title: Simple Simulation of Single-cell RNA Sequencing Data -Version: 1.5.4 -Date: 2018-08-30 +Version: 1.5.5 +Date: 2018-10-03 Author: Luke Zappia Authors@R: c(person("Luke", "Zappia", role = c("aut", "cre"), diff --git a/NEWS.md b/NEWS.md index 1a18be3bf6b12a8226d164e7bebfc508d1e308b6..becf7c5059360c47fc1abb24278f888c58cbbe32 100644 --- a/NEWS.md +++ b/NEWS.md @@ -1,4 +1,8 @@ -## Version 1.5.3 (2018-08-30) +## Version 1.5.5 (2018-10-03) + +* Fix BASiCSEstimate tests + +## Version 1.5.4 (2018-08-30) * Fix installation instructions diff --git a/tests/testthat/test-BASiCSEstimate.R b/tests/testthat/test-BASiCSEstimate.R index f1fe32bc4b9978e84a17fc03c96fe60471344c47..3e1df27accc507d6fbd9a58cfe8b85b26a7d33a6 100644 --- a/tests/testthat/test-BASiCSEstimate.R +++ b/tests/testthat/test-BASiCSEstimate.R @@ -9,7 +9,7 @@ test_that("BASiCSEstimate works", { spike.info <- data.frame(Name = rownames(sc_example_counts)[1:10], Input = rnorm(10, 500, 200), stringsAsFactors = FALSE) - counts <- sc_example_counts[, 1:20] + counts <- sc_example_counts[, 1:30] counts <- counts[rowSums(counts) != 0, ] params <- BASiCSEstimate(counts[1:100, ], spike.info, verbose = FALSE, progress = FALSE) @@ -19,7 +19,7 @@ test_that("BASiCSEstimate works", { test_that("BASiCSEstimate works without spikes", { skip_if_not_installed("BASiCS") set.seed(1) - counts <- sc_example_counts[, 1:20] + counts <- sc_example_counts[, 1:30] counts <- counts[rowSums(counts) != 0, ] batch <- sample(1:2, ncol(counts), replace = TRUE) params <- BASiCSEstimate(counts[1:100, ], batch = batch,