plot_models.Rd
Function to plot individuals models or multiple models for comparison.
plot_models( sims, sim_id = "baseline", comp_remove = "none", time_lim = 100, trans = "na", known = NULL, start_date = ymd("2020-03-21"), x_axis = "Days since beginning of epidemic", plot_title = "SEIQHRF" )
sims | Single or list of sims to plot |
---|---|
sim_id | String or list of strings to name each facet |
comp_remove | Compartments to remove. Suggest c(s.num, r.num) |
time_lim | Number of steps (days) to plot. |
trans | Y-axis transformation (e.g. log2, log10). Default = none. |
known | Dataframe with known compartment numbers to plot alongside projections |
start_date | Date for day 0. Default: ymd("2020-03-21"), |
x_axis | Title for x-axis. Default: 'Days since beginning of epidemic' |
plot_title | Title for whole plot. Default: 'SEIQHRF plot' |
ggplot2 object