init_seiqhrf.Rd
Sets the initial conditions for stochastic individual contact
models simulated with icm
.
init_seiqhrf( s.num = 9997, e.num = 0, i.num = 3, q.num = 0, h.num = 0, r.num = 0, f.num = 0, ... )
s.num | Initial number of *S compartment individuals in the simulated population. An overall population of 10,000 is a good compromise. A set of models will still take several minutes or more to run, in parallel. |
---|---|
e.num | Initial number of E compartment individuals in the simulated population. |
i.num | Initial number of I compartment individuals in the simulated population. |
q.num | Initial number of Q compartment individuals in the simulated population. |
h.num | Initial number of H compartment individuals in the simulated population. |
r.num | Initial number of R compartment individuals in the simulated population. |
f.num | Initial number of F compartment individuals in the simulated population. |
... | Additional initial conditions passed to model. |
The initial conditions for a model solved with icm
should be
input into the init.icm
function. This function handles initial
conditions for both base models and original models using new modules. For
an overview of initial conditions for base ICM class models, consult the
Basic ICMs tutorial.
Use param.icm
to specify model parameters and
control.icm
to specify the control settings. Run the
parameterized model with icm
.