diff --git a/Dockerfile b/Dockerfile index 40dfdea491c5b30872f4eebf1c4388d2c2efd03a..ed6db85effa3ddf5772e39bcfc12c81586a0ee38 100644 --- a/Dockerfile +++ b/Dockerfile @@ -67,13 +67,9 @@ RUN \ ENV HTSLIB=system ENV PATH=$PATH:~/.cargo/bin/ -RUN - git clone https://gitlab.svi.edu.au/biocellgen-public/sgcocaller.git && \ - cd sgcocaller && \ - nimble install . #ADD . /src/ -#RUN nimble install -y https://gitlab.svi.edu.au/biocellgen-public/sgcocaller.git +RUN nimble install -y https://github.com/ruqianl/sgcocaller.git #RUN ls ~/.nimble/lib/ ENV LD_LIBRARY_PATH=:/root/.nimble/lib/:/usr/local/lib/:$LD_LIBRARY_PATH