Last updated: 2021-04-13
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Knit directory: mage_2020_marker-gene-benchmarking/
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Rmd | 63bce66 | Jeffrey Pullin | 2021-02-16 | Add new marker gene type analysis and update FDR + TPR |
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This project aim to benchmark current methods for the detection of cell-type maker genes in scRNA-seq data
The methods were compared on several criteria:
The simulations estimate parameters from the following data sets:
The simulations are visualized in:
Datasets and simulations are compared using countsimQC
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.